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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65623636_65624232_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65623636 - 65624232

Intron Length:

597

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTTAT

U12 Branch Point Sequence:

TTCTTCTTAACA

Flanking Amino Acid:

SCMENGSLFEVGAGWIGKLR

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

89.8

23.7

Major BPS

73.5

0.58

1.2

63.7

43.9

Major PPT

83.9

0.76

0.8

80.8

29.8

Minor 5ss

46.2

-0.4

2.8

67.4

43.6

Minor BPS

84.7

1.09

86.69

32.1

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514