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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65629479_65630237_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65629479 - 65630237

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGTTGA

5'SS Class:

strong_major

3'SS Sequence:

AACTTGTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTACAATTAACT

Flanking Amino Acid:

SFVRISDEDWDIIHRIHLRG

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.1

37.5

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

66.7

0.38

0.9

58.1

42.3

Minor 5ss

33.7

-1.9

2.8

31.8

42.6

Minor BPS

61.4

0.44

1.8

81.43

38.9

Associated Gene:

Gene:

HSD17B4

Ensembl Gene ID:

ENSAPLG00000009938

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010437

65576685 - 65637198

60514