Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65724814_65725242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65724814 - 65725242

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTTCA

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAA

U12 Branch Point Sequence:

AGTCAGTTAAAT

Flanking Amino Acid:

RMASHPTLPYYLTGAQDGSV

Intron Amino Acid Position:

2776

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

72.4

32.9

Major BPS

66.4

0.41

1.1

67.7

36.5

Major PPT

95.8

1.03

0.5

92.1

18.3

Minor 5ss

43.1

-0.8

2.8

56.6

41.9

Minor BPS

46.5

-0.1

2.2

67.56

42.2

Associated Gene:

Gene:

DMXL1

Ensembl Gene ID:

ENSAPLG00000009280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021431

65720416 - 65808583

88168

ENSAPLT00000009708

65720416 - 65808583

88168

ENSAPLT00000024938

65720416 - 65808583

88168