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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65730662_65733017_R


Intron Information:

Intron Rank:
34

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
65730662 - 65733017

Intron Length:
2356

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACACAGT

5'SS Class:
major

3'SS Sequence:
TTTTTAAATACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TACTTTTTAAAT

Flanking Amino Acid:
SMVEEPIINKIETDMGYPGG

Intron Amino Acid Position:
2643

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.4
0.5
1.1
66.2
45.1

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
80.3
0.68
0.9
75
38

Minor 5ss
39.4
-1.2
3.3
58
46.3

Minor BPS
67.6
0.63
1.3
77.65
38.8

Associated Gene:

Gene:
DMXL1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

65720416 - 65808583
88168

65720416 - 65808583
88168