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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6582562_6605499_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6582562 - 6605499

Intron Length:

22938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AATTTATGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTGTTTTCAATT

Flanking Amino Acid:

NCNTKCVTIPSTCSEIWGLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.5

1.1

0.7

87.9

25.6

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

68.2

0.41

42.7

Minor 5ss

35.3

-1.7

3.2

50.4

Minor BPS

64.6

0.54

1.5

79.17

37.8

Associated Gene:

Gene:

SMAD2

Ensembl Gene ID:

ENSAPLG00000004964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005160

6576273 - 6619272

43000

ENSAPLT00000005158

6574134 - 6619272

45139

ENSAPLT00000005125

6579515 - 6619272

39758