About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65865875_65888712_F

Intron Information:

Intron Rank:
3
Intron Class:
major-like
Intron Phase:
2
Intron Coordinates:
65865875 - 65888712
Intron Length:
22838

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTGAGCAGG
5'SS Class:
strong_major
3'SS Sequence:
GTGTGCATTAAAG|G
3'SS Class:
degenerate_major
U2 Branch Point Sequence:
TAATAAT
U12 Branch Point Sequence:
CCTTTAATAATT
Flanking Amino Acid:
ILIGRRFSEDRYPELATVCR
Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83.8
0.8
0.9
68.8
43.8
Major BPS
80
0.75
1
78.6
31
Major PPT
59
0.2
1.2
56.8
42.6
Minor 5ss
33.3
-1.9
2.8
39.7
45.9
Minor BPS
49.5
0.04
1.9
69.16
42.2

Associated Gene:

Gene:
DTWD2
Ensembl Gene ID:
ENSAPLG00000009218
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000043573
65830265 - 65920274
90010
ENSAPLT00000009597
65853134 - 65919320
66187