Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65936654_65936756_F

Intron Information:

Intron Rank:

148310

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

65936654 - 65936756

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATTC

5'SS Class:

weak_major

3'SS Sequence:

GACTTGTTCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTAAA

U12 Branch Point Sequence:

TCTTCTTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.2

68.6

37.4

Major BPS

0.7

0.9

79.6

29.1

Major PPT

59.6

0.22

1.1

58.6

40.8

Minor 5ss

64.5

0.49

2.3

76.7

38.8

Minor BPS

75.9

0.79

1.3

79.33

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036654

65935985 - 65937114

1130