Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_65937200_65937370_F

Intron Information:

Intron Rank:

148313

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

65937200 - 65937370

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTC

5'SS Class:

strong_major

3'SS Sequence:

CACCCATGAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TCCTTCTCACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

0.8

84.7

26.5

Major BPS

0.87

0.8

85.6

Major PPT

56.1

0.14

50.2

36.8

Minor 5ss

44.1

-0.6

2.9

61.1

43.8

Minor BPS

49.9

-0

1.9

61.43

44.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043021

65935985 - 65940876

4892