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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6605590_6606732_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6605590 - 6606732

Intron Length:

1143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAATATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCCATGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

TACTTCTTAACA

Flanking Amino Acid:

TGLYSFSEQTRSLDGRLQVS

Intron Amino Acid Position:

109

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.8

89.3

23.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

75.3

0.57

0.8

70.7

29.2

Minor 5ss

35.6

-1.6

50.6

45.9

Minor BPS

79.7

0.93

1.1

80.05

35.9

Associated Gene:

Gene:

SMAD2

Ensembl Gene ID:

ENSAPLG00000004964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005160

6576273 - 6619272

43000

ENSAPLT00000005158

6574134 - 6619272

45139

ENSAPLT00000005125

6579515 - 6619272

39758