Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66622899_66641558_F

Intron Information:

Intron Rank:

136898

Intron Class:

major

Intron Phase:

Intron Coordinates:

66622899 - 66641558

Intron Length:

18660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

ATTCTTCTTTAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTCTTTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.2

0.59

31.7

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

0.58

1.2

69.9

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034959

66622534 - 66644783

22250

ENSAPLT00000027481

66622814 - 66649083

26270