Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66723384_66724417_R

Intron Information:

Intron Rank:

140377

Intron Class:

major

Intron Phase:

Intron Coordinates:

66723384 - 66724417

Intron Length:

1034

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTCACATCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTCAC

U12 Branch Point Sequence:

ATTCTAAGAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

76.2

0.65

0.9

77.4

26.5

Major PPT

68.3

0.41

0.9

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

43.8

-0.4

1.8

57.44

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042313

66660558 - 66724557

64000