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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66819710_66825368_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66819710 - 66825368

Intron Length:

5659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTCATTTGACT

Flanking Amino Acid:

VMNRTLYVAARDHIYTVDMD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

1.2

76.2

39.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

0.79

0.8

78.9

33.1

Minor 5ss

31.5

-2.1

2.5

37.7

39.6

Minor BPS

61.3

0.44

1.5

77.51

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034437

66816677 - 66879945

63269

ENSAPLT00000024342

66816677 - 66879945

63269

ENSAPLT00000015153

66816677 - 66879945

63269

ENSAPLT00000047680

66816677 - 66879945

63269