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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66827976_66830703_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66827976 - 66830703

Intron Length:

2728

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

TATTTTCTATTT

Flanking Amino Acid:

AFNPSCRNYKMDTLEFLGDE

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.8

83.1

28.6

Major BPS

73.8

0.59

1.3

72.8

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

40.4

-1.1

3.2

57.3

47.4

Minor BPS

49.9

0.07

1.9

73.01

38.4

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024342

66816677 - 66879945

63269

ENSAPLT00000015153

66816677 - 66879945

63269

ENSAPLT00000047680

66816677 - 66879945

63269

ENSAPLT00000034437

66816677 - 66879945

63269