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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66830795_66834987_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66830795 - 66834987

Intron Length:

4193

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAG

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTTTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTGCAT

U12 Branch Point Sequence:

TGGTGCACAGAT

Flanking Amino Acid:

AKHANVALFAEPYFVQAVDY

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

59.8

0.25

1.5

71.4

45.1

Major PPT

80.1

0.68

0.8

73.1

37.3

Minor 5ss

-2.2

3.2

38.7

46.6

Minor BPS

37.5

-0.8

2.2

55.6

45.7

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024342

66816677 - 66879945

63269