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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66845397_66847382_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66845397 - 66847382

Intron Length:

1986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTATTATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAT

U12 Branch Point Sequence:

TTTCTATTATTT

Flanking Amino Acid:

GVCTQLVLGAKLAFEQDIEH

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.8

85.9

23.8

Major BPS

87.1

0.92

0.7

85.9

22.5

Major PPT

78.4

0.64

0.9

77.9

35.3

Minor 5ss

33.7

-1.9

2.8

42.6

38.4

Minor BPS

54.9

0.23

1.8

78.22

38.2

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024342

66816677 - 66879945

63269

ENSAPLT00000015153

66816677 - 66879945

63269

ENSAPLT00000047680

66816677 - 66879945

63269

ENSAPLT00000034437

66816677 - 66879945

63269