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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66849359_66849492_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66849359 - 66849492

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTGTTCATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TTTTATTTAATG

Flanking Amino Acid:

DCQNSFVALNDISTASPDHE

Intron Amino Acid Position:

537

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

77.8

0.63

0.8

72.9

36.9

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

71.8

0.55

1.5

76.08

35.8

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034437

66816677 - 66879945

63269

ENSAPLT00000024342

66816677 - 66879945

63269