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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66849359_66856059_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

66849359 - 66856059

Intron Length:

6701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

ATAATGTAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTTCCCTACCT

Flanking Amino Acid:

DCQNSFVALNGHSSSLVPST

Intron Amino Acid Position:

577

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

71.3

40.1

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

57.8

0.18

1.1

51.8

45.5

Minor 5ss

31.8

-2.1

3.1

36.5

41.9

Minor BPS

63.3

0.5

84.58

42.1

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015153

66816677 - 66879945

63269