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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66849544_66856059_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

66849544 - 66856059

Intron Length:

6516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTCAGTTTA

5'SS Class:

major

3'SS Sequence:

ATAATGTAAACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCTTCCCTACCT

Flanking Amino Acid:

DHEMSYDTVYGHSSSLVPST

Intron Amino Acid Position:

554

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

76.8

34.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

57.8

0.18

1.1

51.8

45.5

Minor 5ss

39.3

-1.2

2.8

46.9

42.8

Minor BPS

63.3

0.5

84.58

42.1

Associated Gene:

Gene:

SEMA6A

Ensembl Gene ID:

ENSAPLG00000014502

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034437

66816677 - 66879945

63269

ENSAPLT00000024342

66816677 - 66879945

63269