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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_66943683_67016041_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
66943683 - 67016041

Intron Length:
72359

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTAG

5'SS Class:
major

3'SS Sequence:
TTTTCTTTCACAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTTTCTTTCACA

Flanking Amino Acid:
SLLECTDLAKNLKKVFVEFS

Intron Amino Acid Position:
289

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.46
1.1
59.6
41.8

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
91.2
0.93
0.6
87.3
23.1

Minor 5ss
35.1
-1.7
3.4
46.5
48.8

Minor BPS
75.9
0.81
1.6
86.93
31.8

Associated Gene:

Gene:
COMMD10

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66942414 - 67047686
105273

66942414 - 67047496
105083