Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67085124_67086659_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67085124 - 67086659

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

AATCTTCAAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTTAATC

Flanking Amino Acid:

QLLDDVFALTQFGYIQIETA

Intron Amino Acid Position:

678

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.66

75.9

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

60.8

0.24

56.4

38.2

Minor 5ss

41.5

-0.9

2.8

57.1

41.1

Minor BPS

75.8

0.79

1.1

78.23

31.1

Associated Gene:

Gene:

LVRN

Ensembl Gene ID:

ENSAPLG00000013734

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043486

67072524 - 67114319

41796

ENSAPLT00000026132

67072524 - 67114319

41796

ENSAPLT00000019786

67073452 - 67114319

40868

ENSAPLT00000014304

67072524 - 67114319

41796