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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67094768_67095086_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67094768 - 67095086

Intron Length:
319

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAAAAAA

5'SS Class:
major

3'SS Sequence:
TTTTGTACTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TTTCTCATAGCT

Flanking Amino Acid:
SLFDSITYNKGASITWMLSG

Intron Amino Acid Position:
486

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.2
0.69
0.9
75.4
28.5

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
80.8
0.69
0.8
79.1
34.2

Minor 5ss
26.7
-2.7
2.8
30.6
42.8

Minor BPS
57.9
0.33
1.9
82.42
38.4

Associated Gene:

Gene:
LVRN

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67073452 - 67114319
40868

67072524 - 67114319
41796

67072524 - 67114319
41796