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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67158523_67167536_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67158523 - 67167536

Intron Length:
9014

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACTGTGA

5'SS Class:
major

3'SS Sequence:
TGTTCTTTTTTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTAAT

U12 Branch Point Sequence:
GGACATTTAATT

Flanking Amino Acid:
ELDLIFHVDKVHNILAEMVM

Intron Amino Acid Position:
188

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.45
1.1
59.6
41.8

Major BPS
90.7
1.01
0.7
90
19.9

Major PPT
86
0.81
0.7
85.1
29.7

Minor 5ss
35.1
-1.7
3.4
47.8
47.7

Minor BPS
53.6
0.19
1.5
65.22
38.9

Associated Gene:

Gene:
AP3S1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67148677 - 67181420
32744

67148763 - 67181420
32658