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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67199110_67201683_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67199110 - 67201683

Intron Length:

2574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTTGTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GTTAATGCAACT

Flanking Amino Acid:

LRENQCAYINDSIGLHRVEN

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

72.7

39.4

Major BPS

84.4

0.85

34.5

Major PPT

75.8

0.58

0.9

72.4

32.3

Minor 5ss

-0.3

2.8

66.9

43.9

Minor BPS

43.7

-0.3

2.3

66.87

43.5

Associated Gene:

Gene:

CDO1

Ensembl Gene ID:

ENSAPLG00000013485

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031374

67195016 - 67202542

7527

ENSAPLT00000014042

67195016 - 67204616

9601