Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67243096_67243745_F

Intron Information:

Intron Rank:

127301

Intron Class:

major

Intron Phase:

Intron Coordinates:

67243096 - 67243745

Intron Length:

650

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATGTTT

5'SS Class:

major

3'SS Sequence:

TTTACCTCCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTGATTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

72.3

39.7

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

75.9

0.58

0.8

74.3

30.7

Minor 5ss

42.3

-0.9

3.4

56.3

47.9

Minor BPS

0.17

1.9

74.83

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027377

67242674 - 67244260

1587

ENSAPLT00000017395

67216072 - 67244260

28189