Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67270757_67272360_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67270757 - 67272360

Intron Length:

1604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

TTTTTGTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

GTTTTGTTAAAA

Flanking Amino Acid:

QGTKCTLEFQVITGGHYDVD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

71.4

0.48

1.7

84.6

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

57.1

0.22

2.1

72.99

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029546

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047496

67270586 - 67275696

5111