Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67318322_67318959_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67318322 - 67318959

Intron Length:

638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGG

5'SS Class:

major

3'SS Sequence:

TATTTACTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTACTTTGAACT

Flanking Amino Acid:

KRAEKMTELSGNSKKHITAL

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

79.7

0.67

0.8

73.6

35.7

Minor 5ss

30.3

-2.3

3.3

39.2

46.3

Minor BPS

63.7

0.51

1.4

78.98

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010952

67314828 - 67326548

11721