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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67319066_67320084_F

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
67319066 - 67320084
Intron Length:
1019

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTTAGTTTG
5'SS Class:
major
3'SS Sequence:
ATACTTTCTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AGTTAAC
U12 Branch Point Sequence:
AGTCAGTTAACC
Flanking Amino Acid:
NSLNLAMQTLKHMPGHTSRE
Intron Amino Acid Position:
157

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.2
0.57
1.2
73.7
37.9
Major BPS
65.7
0.39
1.1
67.4
36.7
Major PPT
76.4
0.59
0.8
74.5
35.5
Minor 5ss
41.9
-0.9
2.7
51.6
39.1
Minor BPS
49.1
-0
2.2
64.53
40.3

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000010495
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000010952
67314828 - 67326548
11721