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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67354846_67357581_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67354846 - 67357581

Intron Length:

2736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

TAAAAAATTCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TAATCTCTAACT

Flanking Amino Acid:

IYYLPENNPMKSSLVEEKKT

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

84.6

33.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

56.9

0.16

45.6

45.1

Minor 5ss

41.1

-1

2.8

51.8

38.9

Minor BPS

68.2

0.65

1.6

83.12

37.3

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360

ENSAPLT00000048098

67343998 - 67401786

57789