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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67357642_67357998_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67357642 - 67357998

Intron Length:

357

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTT

5'SS Class:

major

3'SS Sequence:

CTTAAAATTGTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

GTCTCTTAAAAT

Flanking Amino Acid:

EKNSTQCQMKEQEEKSTQDH

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

75.5

40.6

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

67.2

0.39

59.9

40.2

Minor 5ss

41.4

-1

3.1

55.9

42.3

Minor BPS

57.3

0.31

1.8

73.53

43.4

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360

ENSAPLT00000048098

67343998 - 67401786

57789