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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67374457_67374566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67374457 - 67374566

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGGCTT

5'SS Class:

major

3'SS Sequence:

TTTTTACTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

CTTTTTTTACTT

Flanking Amino Acid:

GECGSLPDTDKAGKCEVLQS

Intron Amino Acid Position:

1075

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.1

75.5

40.2

Major BPS

81.6

0.78

0.8

24.9

Major PPT

89.9

0.9

0.7

82.1

34.6

Minor 5ss

39.1

-1.2

3.6

61.1

43.6

Minor BPS

63.2

0.49

1.6

78.3

39.3

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048098

67343998 - 67401786

57789

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360