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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67377580_67379056_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67377580 - 67379056

Intron Length:

1477

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGTCTG

5'SS Class:

major

3'SS Sequence:

CTGCAAATTGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATTTTTACT

Flanking Amino Acid:

DESASPVSAVGENEAVLHQA

Intron Amino Acid Position:

1207

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

67.1

43.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

55.7

0.13

1.1

53.8

39.3

Minor 5ss

44.1

-0.6

2.8

55.2

43.3

Minor BPS

0.55

1.6

84.12

36.5

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360

ENSAPLT00000048098

67343998 - 67401786

57789