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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67397761_67398639_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67397761 - 67398639

Intron Length:

879

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTAACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTGAAT

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

VEGNFESPCKGYSTKSTSSP

Intron Amino Acid Position:

1984

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

71.5

40.2

Major BPS

62.3

0.31

1.4

73.3

39.1

Major PPT

90.7

0.92

0.7

88.7

26.8

Minor 5ss

27.4

-2.6

2.7

31.3

42.4

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360

ENSAPLT00000048098

67343998 - 67401786

57789