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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67398683_67400016_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67398683 - 67400016

Intron Length:

1334

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTAAA

5'SS Class:

strong_major

3'SS Sequence:

AACTCTTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTGAATAACA

Flanking Amino Acid:

KSTSSPKRASGNPFQKTEAS

Intron Amino Acid Position:

1998

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

75.9

35.2

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

79.2

0.66

0.9

72.4

36.8

Minor 5ss

33.8

-1.8

38.1

42.1

Minor BPS

53.5

0.11

2.3

77.79

38.6

Associated Gene:

Gene:

BDP1

Ensembl Gene ID:

ENSAPLG00000024276

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018607

67349427 - 67401786

52360

ENSAPLT00000011616

67349427 - 67401786

52360

ENSAPLT00000048098

67343998 - 67401786

57789