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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67421699_67429226_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67421699 - 67429226

Intron Length:

7528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCACA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTGTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCAATTCTAATG

Flanking Amino Acid:

GTIFLGGPPLVKAATGEEVS

Intron Amino Acid Position:

199

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

73.3

37.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

81.2

0.7

0.8

31.6

Minor 5ss

39.8

-1.1

2.8

42.5

Minor BPS

46.5

-0.4

1.7

48.72

39.4

Associated Gene:

Gene:

MCCC2

Ensembl Gene ID:

ENSAPLG00000011286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017458

67406136 - 67445867

39732

ENSAPLT00000011781

67408598 - 67445867

37270

ENSAPLT00000028513

67406136 - 67438470

32335