Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67452717_67452800_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67452717 - 67452800

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTGGGAAG

5'SS Class:

major

3'SS Sequence:

GGTGTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTGAT

U12 Branch Point Sequence:

GAGGGCTGATGG

Flanking Amino Acid:

GGGASREKELIEALQEVLEK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.24

1.2

54.3

44.1

Major BPS

58.4

0.21

1.4

51.1

46.3

Major PPT

0.47

62.7

39.7

Minor 5ss

26.7

-2.7

3.1

28.4

37.5

Minor BPS

33.2

-1.4

2.1

29.62

41.2

Associated Gene:

Gene:

CARTPT

Ensembl Gene ID:

ENSAPLG00000024632

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036277

67452494 - 67453070

577