Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67524839_67528531_R

Intron Information:

Intron Rank:

132605

Intron Class:

major

Intron Phase:

Intron Coordinates:

67524839 - 67528531

Intron Length:

3693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

ATTTTTAAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

90.4

0.7

90.2

19.3

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

54.4

0.22

1.9

78.49

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038029

67524527 - 67569131

44605

ENSAPLT00000023733

67524527 - 67542378

17852