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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67541959_67542294_R

Intron Information:

Intron Rank:

132612

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

67541959 - 67542294

Intron Length:

336

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

CAG|GTAAGGGCG

5'SS Class:

strong_major

3'SS Sequence:

TTTCGGCCGGCTG|T

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATTTTTTTAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

70.5

38.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

39.1

-0.6

3.2

54.5

41.4

Minor 5ss

29.5

-2.3

3.4

38.5

46.7

Minor BPS

77.2

0.83

79.83

28.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038029

67524527 - 67569131

44605