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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67586419_67605796_F

Intron Information:

Intron Rank:
134325
Intron Class:
major
Intron Phase:
Intron Coordinates:
67586419 - 67605796
Intron Length:
19378

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTTGGACAA
5'SS Class:
major
3'SS Sequence:
TCCCTGCTCTCAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTAAAT
U12 Branch Point Sequence:
TCTCTCTCATTT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.9
0.42
1.2
59.9
40.7
Major BPS
82.3
0.8
0.9
87.6
25.7
Major PPT
75
0.56
0.8
72.1
32.5
Minor 5ss
26.2
-2.7
3
30.3
42.8
Minor BPS
49.4
0.03
1.8
68.97
42.5

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000022203
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000020653
67586313 - 67605829
19517