Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67671823_67676117_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67671823 - 67676117

Intron Length:

4295

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TCTGCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTATAT

U12 Branch Point Sequence:

TCTCCCTTGAGT

Flanking Amino Acid:

DLIMIDQFIDRTTKRHSTLY

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.8

1.01

0.7

85.8

24.1

Major BPS

55.3

0.13

1.2

52.8

42.9

Major PPT

84.6

0.78

0.8

76.4

37.6

Minor 5ss

30.6

-2.2

2.5

34.4

41.2

Minor BPS

66.6

0.6

1.7

80.72

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046472

67658629 - 67691018

32390

ENSAPLT00000016442

67658629 - 67681291

22663