Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67713845_67716920_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67713845 - 67716920

Intron Length:

3076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGAGC

5'SS Class:

major

3'SS Sequence:

TCCCTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

CGCCCGCTGACG

Flanking Amino Acid:

TNSFGRTPLQVTMLGSPRVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

38.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

74.6

0.55

0.7

24.8

Minor 5ss

31.2

-2.1

3.4

42.5

44.6

Minor BPS

39.7

-0.9

2.3

41.49

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023995

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043865

67712711 - 67717064

4354