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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67855938_67857495_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67855938 - 67857495

Intron Length:

1558

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGAAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TTAAGAGTAACT

Flanking Amino Acid:

GNVTKMIQVRGRGRAAGSKC

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

76.6

33.7

Major BPS

77.9

0.69

0.8

75.9

Major PPT

70.8

0.47

65.3

41.2

Minor 5ss

37.7

-1.4

3.1

47.6

48.1

Minor BPS

44.4

-0.3

2.5

70.89

45.4

Associated Gene:

Gene:

DDX58

Ensembl Gene ID:

ENSAPLG00000015091

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030847

67844257 - 67861958

17702

ENSAPLT00000015756

67840728 - 67860849

20122

ENSAPLT00000041621

67840560 - 67861046

20487

ENSAPLT00000033158

67840728 - 67860849

20122