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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_67877795_67878809_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67877795 - 67878809

Intron Length:
1015

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAATGAAC

5'SS Class:
strong_major

3'SS Sequence:
ATTTTTATAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
ATTTTTATAACA

Flanking Amino Acid:
STDIVLTITKHLRQVGVVGK

Intron Amino Acid Position:
267

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.8
0.73
1
74.9
34.9

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
79
0.65
0.9
75
38

Minor 5ss
32.6
-2
3.1
42.6
44.5

Minor BPS
67.1
0.53
1.5
78.19
31.7

Associated Gene:

Gene:
ACO1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67863788 - 67888167
24380