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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68040231_68045594_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68040231 - 68045594

Intron Length:

5364

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAG|GCAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

TGGAACACTGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATTG

Flanking Amino Acid:

ELNNTNEVIIRYVGKDYSYA

Intron Amino Acid Position:

482

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.6

1.12

0.8

80.1

34.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

57.2

0.16

48.8

Minor 5ss

30.2

-2.3

3.8

41.6

Minor BPS

63.6

0.29

1.6

70.13

38.1

Associated Gene:

Gene:

TDRD7

Ensembl Gene ID:

ENSAPLG00000003551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003644

68020316 - 68056172

35857