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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68087668_68088223_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68087668 - 68088223

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTGTGGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTTCCT

U12 Branch Point Sequence:

TGTTCCTCTGTG

Flanking Amino Acid:

TRHLGPAELQSKAGEVLLYY

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

76.9

38.6

Major BPS

33.5

-1

4.3

71.4

45.1

Major PPT

57.7

0.17

1.2

53.4

45.8

Minor 5ss

32.6

-2

3.1

44.2

Minor BPS

37.8

-1

3.6

56.4

45.2

Associated Gene:

Gene:

TSTD2

Ensembl Gene ID:

ENSAPLG00000002690

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002720

68077067 - 68088573

11507