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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68088840_68088970_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68088840 - 68088970

Intron Length:

131

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTCGGAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

GGCTCTCCAACC

Flanking Amino Acid:

RHSDDSDDSDGQPHKRRRTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

89.7

0.98

0.7

89.9

Major PPT

0.23

1.1

55.1

44.6

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

47.4

-0.2

1.9

41.3

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137