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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68089396_68090523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68089396 - 68090523

Intron Length:

1128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTACGTATG

5'SS Class:

major

3'SS Sequence:

TTTTCTGTGTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

AAACTTCTAACA

Flanking Amino Acid:

KSKILRILCTVARLLPEKLT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

65.8

45.4

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

80.1

0.68

80.8

36.8

Minor 5ss

40.3

-1.1

3.1

51.5

45.1

Minor BPS

-0

1.6

57.98

34.5

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137