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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68090681_68092715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68090681 - 68092715

Intron Length:

2035

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTAAGTTGT

5'SS Class:

major

3'SS Sequence:

TGGTCTTTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTCATGTAAAA

Flanking Amino Acid:

VNMYNEAVHLVRFLSDLVNC

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

74.3

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.65

0.8

77.4

36.9

Minor 5ss

43.8

-0.7

2.9

59.9

39.9

Minor BPS

45.4

-0.3

2.1

61.59

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137