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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68102278_68102985_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68102278 - 68102985

Intron Length:

708

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTGATAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTCCTTTTGATA

Flanking Amino Acid:

LDTMNTTCVDRFINWFSHHL

Intron Amino Acid Position:

414

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

72.3

37.6

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

65.8

0.36

1.1

66.7

37.7

Minor 5ss

33.4

-1.9

3.6

46.6

48.7

Minor BPS

59.8

0.3

1.2

66.4

34.2

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137