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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68107229_68108496_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68107229 - 68108496

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

AAATAACTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAT

U12 Branch Point Sequence:

CTTCAAATAACT

Flanking Amino Acid:

VPNPNQDDDDDEGFTFNPLK

Intron Amino Acid Position:

536

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

73.9

30.8

Major BPS

77.3

0.68

81.5

Major PPT

65.3

0.35

56.3

43.4

Minor 5ss

38.4

-1.3

3.1

47.6

42.6

Minor BPS

48.1

-0

2.1

73.19

42.7

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137