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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68108600_68109937_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68108600 - 68109937

Intron Length:

1338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TATCTGTTAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTAT

U12 Branch Point Sequence:

TATTCTGTATCT

Flanking Amino Acid:

SFSHSFSALAKFHEVFKTLA

Intron Amino Acid Position:

570

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

58.9

0.22

1.5

59.6

46.8

Major PPT

62.9

0.29

1.2

64.2

40.4

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

55.4

0.25

2.2

80.75

41.3

Associated Gene:

Gene:

NCBP1

Ensembl Gene ID:

ENSAPLG00000016318

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017045

68088797 - 68117933

29137